Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932842.1_cds_XP_016479275.1_70831
CDS Infomation

[gene=LOC107800597] [db_xref=GeneID:107800597] [protein=bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase] [protein_id=XP_016479275.1] [location=complement(join(17755..17895,18350..18463,18579..18749,19669..19752,19896..20009,20119..20238,20631..20759,21368..21471,21550..21643,21743..21977,25624..25754))] [gbkey=CDS]
Sequence

ATGGCTGCTACTACTACCGCATCTTCGTCAAGAATTGCTTCAAGACCCTCCATTCCTCCT
GGACTTCATTCTGATTCATTCAATCCCACTTCAATCTCTTTCTCTTCTAACCTTCACAGT
CTTTCTCTCAAATCTTCAGGCTCAAAGAGACAGCTATACTCACCTAGAACAGGTGCAGTT
GTCATAACACAGAGCATGGACAGAGTTGAGGTTGATATCTCGCTCAGCCCTAGGGTAAAT
TCAGTAAAGCCTTCAAAAACAGTTGCTATAACCGACCAGGCAACTGCTCTTGCGCAAGCT
GGTGTACCTGTTATTCGATTAGCAGCTGGTGAACCTGATTTTGACACTCCAGTTCCTATA
GCAGAGGCTGGGATAAATGCAATTCGCGAAGGTCATACCAGGTATACACCAAATGCAGGT
ACTATGGAACTTCGTTCAGCGATTTGTCATAAGTTAAAAGAGGAGAATGGGCTATCATAC
ACGCCTGATCAGATTTTGGTAAGCAATGGGGCAAAACAAAGTATTGTACAGGCAGTGCTT
GCAGTTTGTTCCCCAGGAGATGAGGTTCTTATTCCAGCTCCCTTTTGGGTGAGTTACCCT
GAAATGGCAAGGATGGCAGATGCAACGCCTGTGATTCTTCCAACCAGCATATCTGAAGAT
TTTCTCTTACATCCAAAGCTTCTTGAATCTAAACTTAGCGAGAAGTCAAGACTTCTGATT
CTTTGTTCTCCATCCAACCCAACAGGGTCTGTTTACCCTCGGAAATTGCTTGAAGAGATT
GCTGAGATTGTTGCTAGGCATCCGAGGCTTCTTGTGATATCAGATGAAATTTACGAACAC
ATTATTTATGCACCAGCAACTCATACCAGCTTTGCATCTTTGCCTGGTATGTGGGATCGG
ACTCTCACCGTAAATGGTTTCTCTAAGGCATTTGCGATGACTGGTTGGAGACTTGGTTAT
ATAGCTGGTCCTAAACACTTTGTTTCTGCATGCAATAAGATCCAGAGCCAGTTCACATCA
GGTGCCAGTAGCATCTCCCAAAAAGCAGCTGTGGCTGCTCTGGGACTGGGCTATGCTGGT
GGAGAAGCAGTTGCAACTATGGTAAAAGCATTCCGTAAGCGGCGAGATTACCTTGTCAAG
AGCTTTGGGGAAATAGATGGTGTCAAAATTTCAGAGCCTCGGGGAGCTTTCTATCTATTT
ATTGATTTAAGCTCTTATTATGGAGCAGAGGTTGATGGATTTGGCTCCATCAACAACTCA
GAATCTCTTTGCCGATATTTGCTGGATAAAGCTCAAGTAGCGCTTGTCCCGGGGGATGCA
TTCGGGGATGACACATGTATCCGTATCTCCTATGCAGCATCGCTCTCAACCTTGCAGGCA
GCTGTGGAGAGAATCAACAAAGCATTGGTTACTCTTAAACCTACTGTCCCAGTTTAG

Peptide Sequence

PEP ID

XP_016479275.1
PEP Infomation

PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase [Nicotiana tabacum]
Sequence

MAATTTASSSRIASRPSIPPGLHSDSFNPTSISFSSNLHSLSLKSSGSKRQLYSPRTGAV
VITQSMDRVEVDISLSPRVNSVKPSKTVAITDQATALAQAGVPVIRLAAGEPDFDTPVPI
AEAGINAIREGHTRYTPNAGTMELRSAICHKLKEENGLSYTPDQILVSNGAKQSIVQAVL
AVCSPGDEVLIPAPFWVSYPEMARMADATPVILPTSISEDFLLHPKLLESKLSEKSRLLI
LCSPSNPTGSVYPRKLLEEIAEIVARHPRLLVISDEIYEHIIYAPATHTSFASLPGMWDR
TLTVNGFSKAFAMTGWRLGYIAGPKHFVSACNKIQSQFTSGASSISQKAAVAALGLGYAG
GEAVATMVKAFRKRRDYLVKSFGEIDGVKISEPRGAFYLFIDLSSYYGAEVDGFGSINNS
ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLSTLQAAVERINKALVTLKPTVPV

Transcript Sequence

Gene sequence data has not been registered.